BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008G09SP1|AL425928
(821 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1449 1628 0.0
>3x_Contig1449
Length = 7865
Score = 1628 bits (821), Expect = 0.0
Identities = 821/821 (100%)
Strand = Plus / Minus
Query: 1 ggtaaggttctattctggtatggtgtcaaagatttgaacactgtatccgaattaatatcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2586 ggtaaggttctattctggtatggtgtcaaagatttgaacactgtatccgaattaatatcc 2527
Query: 61 gagttcattaagacctcccctgaaagcggtaccgctccatccttctctggttcctccagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2526 gagttcattaagacctcccctgaaagcggtaccgctccatccttctctggttcctccagt 2467
Query: 121 ggtgtattttccagtggtcaatcatccagatcttactccactagggccagatctgctcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2466 ggtgtattttccagtggtcaatcatccagatcttactccactagggccagatctgctcct 2407
Query: 181 aaagtagaaggcactaacaagagccctgctaaagttgctttgattggtgccagaggttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2406 aaagtagaaggcactaacaagagccctgctaaagttgctttgattggtgccagaggttac 2347
Query: 241 acaggtcaaaatcttatttcattgatagactcacatccatttttggaattatctcacgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2346 acaggtcaaaatcttatttcattgatagactcacatccatttttggaattatctcacgtc 2287
Query: 301 tcctctcgtcaaaacgctggtaagaagttggaaggatataacaagtctgagattatttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2286 tcctctcgtcaaaacgctggtaagaagttggaaggatataacaagtctgagattatttat 2227
Query: 361 tcgaatctacaaattgatgacataaagaaactagaaagtgaaggtgctgtcgatgtgtgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2226 tcgaatctacaaattgatgacataaagaaactagaaagtgaaggtgctgtcgatgtgtgg 2167
Query: 421 gtcatggcgttgccaaacaaagtgtgcgaaccattcgttgaggccattgagtcggttgcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2166 gtcatggcgttgccaaacaaagtgtgcgaaccattcgttgaggccattgagtcggttgcc 2107
Query: 481 aacggtaaatccaaaattgtcgatctatccgctgatcatagatttgtcccggagacggaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2106 aacggtaaatccaaaattgtcgatctatccgctgatcatagatttgtcccggagacggaa 2047
Query: 541 tggagctacggattaccagagttaaacaacagagaagcaattgccaatgctaaaaagatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2046 tggagctacggattaccagagttaaacaacagagaagcaattgccaatgctaaaaagatt 1987
Query: 601 gctaaccccggttgttacgccaccggtgcccaagtagcgattgctcctctatcggaatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1986 gctaaccccggttgttacgccaccggtgcccaagtagcgattgctcctctatcggaatac 1927
Query: 661 atcacaggattacccacagtctttggtgtttctggttattctggtgctggtactacacca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1926 atcacaggattacccacagtctttggtgtttctggttattctggtgctggtactacacca 1867
Query: 721 tctccaaagaatgatccaaaattcttgaacaacaatctaattccttactccttaacaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1866 tctccaaagaatgatccaaaattcttgaacaacaatctaattccttactccttaacaaac 1807
Query: 781 catatccatgagcgtgaaatttcaactcgtttgggtttgga 821
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1806 catatccatgagcgtgaaatttcaactcgtttgggtttgga 1766
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5481
Number of Sequences: 1807
Number of extensions: 5481
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 821
length of database: 10,358,551
effective HSP length: 16
effective length of query: 805
effective length of database: 10,329,639
effective search space: 8315359395
effective search space used: 8315359395
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)